FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711488

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711488
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences588425
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTT6680.11352338870714195No Hit
TTTTTTTTTTTT6050.10281684156859412No Hit
TTTTTTTTTTTTT6010.10213706079789267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)