FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711553

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711553
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences256890
Sequences flagged as poor quality0
Sequence length10-85
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAA8220.3199813149597104No Hit
AAAAAAAAAAAA7810.3040211763789949No Hit
AAAAAAAAAAAAA7500.29195375452528316No Hit
AAAAAAAAAA7470.29078593950718207No Hit
AAAAAAAAAAAAAA6050.23550936198372843No Hit
AAAAAAAAAAAAAAA5570.21682432169411034No Hit
AAATAGAATT4670.18178987115107634No Hit
AAAAAAAAAAAAAAAA4300.16738681926116236No Hit
AAAAAAAAAAAAAAAAA3100.12067421853711705No Hit
AAAAAAAAAAAAAAAAAA3000.11678150181011328No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)