FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005711556

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005711556
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences252630
Sequences flagged as poor quality0
Sequence length10-61
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTT7530.2980643629022681No Hit
TTTTTTTTTTTTT7220.28579345287574714No Hit
TTTTTTTTTTTT7220.28579345287574714No Hit
TTTTTTTTTTTTTT6890.27273087123461187No Hit
TTTTTTTTTT6530.25848078217155523No Hit
TTTTTTTTTTTTTTT5500.21770969401892093No Hit
TTTTTTTTTTTTTTTT4560.18050112813205083No Hit
TTTTTTTTTTTTTTTTTT4430.17535526263705814No Hit
TTTTTTTTTTTTTTTTT4270.1690218897201441No Hit
TTTTTTTTTTTTTTTTTTT3350.1326049954478882No Hit
TTTTTTTTTTTTTTTTTTTT2650.10489648893638918No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)