FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005713104

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005713104
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences386030
Sequences flagged as poor quality0
Sequence length10-61
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTT5130.13289122607051265No Hit
TTTTTTTTTTTTT4650.12045695930368105No Hit
TTTTTTTTTTTTTTTT4420.11449887314457426No Hit
TTTTTTTTTTTTTTT4280.11087221200424836No Hit
TTTTTTTTTTT4110.10646840919099551No Hit
TTTTTTTTTTTT3910.10128746470481567No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)