FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005713150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005713150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1109595
Sequences flagged as poor quality0
Sequence length10-61
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT16520.14888315105962086No Hit
TTTTTTTTTTTTT16460.14834241322284256No Hit
TTTTTTTTTTT15960.14383626458302354No Hit
TTTTTTTTTTTTTT15620.1407720835079466No Hit
TTTTTTTTTT13690.12337834975824512No Hit
TTTTTTTTTTTTTTT12840.11571789707055277No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)