FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005713152

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005713152
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1123793
Sequences flagged as poor quality0
Sequence length10-61
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT17360.15447684760449656No Hit
TTTTTTTTTTT16960.15091747323572935No Hit
TTTTTTTTTTTTT16670.14833692681837313No Hit
TTTTTTTTTTTTTT15550.13837067858582497No Hit
TTTTTTTTTT13820.12297638444090683No Hit
TTTTTTTTTTTTTTT13040.1160356044218108No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)