FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005713182

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005713182
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1367089
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT24030.17577494954607928No Hit
TTTTTTTTTTTTT24010.17562865329177546No Hit
TTTTTTTTTTT23190.16963050686531747No Hit
ATTCTATTTAC21910.16026754658987089No Hit
TTTTTTTTTTTTTT20630.1509045863144243No Hit
TTTTTTTTTT20550.1503194012972089No Hit
TTTTTTTTTTTTTTT17350.12691200060859242No Hit
TTTTTTTTTTTTTTTT13780.10079811921535468No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)