Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005715202 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 274488 |
Sequences flagged as poor quality | 0 |
Sequence length | 10-85 |
%GC | 45 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
TCCATTGGTTTTAAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGA | 361 | 0.13151758911136371 | TruSeq Adapter, Index 2 (100% over 36bp) |
TCCATTGGTTTTACCGAGATCGGAAGAGCACACGTCTGAACTCCAGTCAC | 306 | 0.11148028329107283 | Illumina Multiplexing PCR Primer 2.01 (100% over 34bp) |
TCCATTGGTTTTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGAT | 298 | 0.1085657660808487 | TruSeq Adapter, Index 2 (100% over 37bp) |
TCCATTGGTAGATCGGAAGAGCACACGTCTGAACTCCAGTCACCGATGTA | 281 | 0.10237241700912245 | TruSeq Adapter, Index 2 (100% over 40bp) |