FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005715219

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005715219
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences129759
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTT2560.19728882004331105No Hit
TTTTTTTTTTTTT2510.19343552277684015No Hit
TTTTTTTTTTTTTT2510.19343552277684015No Hit
TTTTTTTTTTTTTTT2420.1864995876971925No Hit
TTTTTTTTTTT2200.16954507972472044No Hit
TTTTTTTTTTTTTTTT2030.15644386901871932No Hit
TTTTTTTTTTTTTTTTT1780.13717738268636473No Hit
TTTTTTTTTT1760.13563606377977636No Hit
TTTTTTTTTTTTTTTTTTT1510.11636957744742175No Hit
TTTTTTTTTTTTTTTTTT1450.11174562072765665No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)