FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005715221

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005715221
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences133120
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTT2750.20658052884615385No Hit
TTTTTTTTTTTT2640.19831730769230768No Hit
TTTTTTTTTTTTTT2540.19080528846153846No Hit
TTTTTTTTTTT2470.185546875No Hit
TTTTTTTTTTTTTTTT2360.17728365384615385No Hit
TTTTTTTTTTTTTTT2330.17503004807692307No Hit
TTTTTTTTTTTTTTTTT2060.15474759615384615No Hit
TTTTTTTTTT1710.12845552884615385No Hit
TTTTTTTTTTTTTTTTTT1630.12244591346153846No Hit
TTTTTTTTTTTTTTTTTTT1580.11868990384615384No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)