FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005715227

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005715227
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences210766
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTT3870.1836159532372394No Hit
TTTTTTTTTTTTT3850.1826670335822666No Hit
TTTTTTTTTTTT3800.18029473444483454No Hit
TTTTTTTTTTTTTT3800.18029473444483454No Hit
TTTTTTTTTTTTTTT3420.1622652610003511No Hit
TTTTTTTTTT3050.14471024738335406No Hit
TTTTTTTTTTTTTTTT2600.12335955514646574No Hit
TTTTTTTTTTTTTTTTT2430.11529373807919684No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)