FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005716047

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716047
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211534
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAA2720.12858453014645402No Hit
AAAAAAAAAAA2610.12338442047141358No Hit
AAAAAAAAAAAA2440.1153478873372602No Hit
AAAAAAAAAA2420.11440241285088922No Hit
AAAAAAAAAAAAAA2180.1030567190144374No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)