FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005716048

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716048
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences211534
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTT2560.12102073425548612No Hit
TTTTTTTTTTTTT2530.11960252252592964No Hit
TTTTTTTTTT2350.11109325214859077No Hit
TTTTTTTTTTTT2330.11014777766221978No Hit
TTTTTTTTTTTTTT2160.10211124452806641No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)