FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005716051

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716051
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences212816
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAA2740.1287497180663108No Hit
AAAAAAAAAAAA2720.12780993910232313No Hit
AAAAAAAAAA2450.11512292308848959No Hit
AAAAAAAAAAAAA2380.11183369671453275No Hit
AAAAAAAAAAAAAA2370.11136380723253891No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)