FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005716052

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716052
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences212816
Sequences flagged as poor quality0
Sequence length10-61
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTT2550.11982181790842793No Hit
TTTTTTTTTTTT2510.1179422599804526No Hit
TTTTTTTTTTTTTT2390.11230358619652657No Hit
TTTTTTTTTT2240.10525524396661906No Hit
TTTTTTTTTTTTT2210.10384557552063756No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)