FastQCFastQC Report
Thu 23 Jun 2022
EGAF00005716057

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716057
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences210689
Sequences flagged as poor quality0
Sequence length10-85
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAAAAAAAAAAAA2730.1295748710184205No Hit
AAAAAAAAAAAA2670.1267270716553783No Hit
AAAAAAAAAAA2650.1257778052010309No Hit
AAAAAAAAAA2290.10869100902277763No Hit
AAAAAAAAAAAAAA2260.10726710934125655No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)