FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005716457

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716457
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences243311
Sequences flagged as poor quality0
Sequence length10-85
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGGTTGGTTTTACC16930.695817287340071No Hit
CTGGTTGGTTTTACCC4840.1989223668473682No Hit
CTGGTTGGTTTTACCA3110.1278199505982056No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)