FastQCFastQC Report
Sat 18 Jun 2022
EGAF00005716483

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005716483
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences638716
Sequences flagged as poor quality0
Sequence length10-85
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GAGGCTTGGTTTACC55760.8730014591774748No Hit
GAGGCTTGGTTTACCA21570.33770877823633666No Hit
GAGGCTTGGTTTACCCA10140.15875600423349345No Hit
GAGGCTTGGTTTACCC9190.14388241409327462No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)