FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14179918
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TATACCG8550.016.1104935
CCGATCG4501.2257133E-616.110499
GTATAGG24600.015.037281
TAGGTCG44100.013.809576145
GTGTTAA55900.013.7539771
CTACACT51500.013.2325944
TTACCCG14850.013.1814034
TTATACT58200.012.8303544
GTCTTAG34500.012.8246341
GTATTAT56800.012.7698531
GTATTAC41900.012.4638631
CTATACT36750.012.4281814
TACACCG35550.012.2358165
GTATTAA54400.012.1332381
CGTGTCG49900.011.768582145
TTAATAC53600.011.7676453
GGTCGCG162250.011.707287145
TATACGC8756.801747E-811.5999222
GCGTTAC8203.6532765E-711.4990971
GTCTTAA54900.011.4942631
Produced by FastQC (version 0.11.5)