FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718557

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718557
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14686896
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAACCCG16200.014.319535
TATACCG8652.0008883E-1114.2471065
CTACACT50850.013.2581474
GTATTAC42250.013.247981
TATTCGC6252.607865E-612.7586154
GTATAGG26900.012.4305741
GTACTAG23050.012.299271
GTGTTAA60200.012.0750561
GTATTGG63000.011.9999231
TAATACT66600.011.9731744
GTGTTAT53750.011.9011751
GTATTAT58050.011.7709441
GTATATG57800.011.6960921
CGAACCG3752.7846944E-411.5988195
TACACCG37500.011.5988195
GTCTAGT27100.011.5341291
TAGACCG10103.4779077E-911.4839795
TCTAGAC41050.011.4786563
GTCTTAA59200.011.2967051
TATCGTG12305.2750693E-1111.1980475
Produced by FastQC (version 0.11.5)