FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718566

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718566
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16695118
Sequences flagged as poor quality0
Sequence length151
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAC49950.015.5381351
GTATTAG36200.014.6273251
TAACGCA10350.014.0091324
GTATTAT66950.013.5428481
GTGTTAA70000.013.2636331
GTCTTAG41600.013.25167751
GTATTAA63650.012.6495521
TATACTG71750.012.5290695
TCTATAC47350.012.4022643
TTAGACG13550.012.3058084
ATTAGAC41250.012.1272143
GCGTTAC10806.366463E-1112.089251
TACGTCG4806.0943654E-412.0828045
TTATACT67700.011.8865534
GTGCTAG61750.011.6291721
CTATACT44700.011.5152254
TATACCG9451.5990736E-811.5074335
GTCTTAC52850.011.3915731
GTACTAA47200.011.372091
GGTTTAT69300.011.3042331
Produced by FastQC (version 0.11.5)