FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718569

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718569
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1623770
Sequences flagged as poor quality0
Sequence length151
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTAACCG1750.003661879320.7121565
TCTAGAC6700.020.5575893
ACCGTAG2155.0615106E-420.2304788
CCTATAC3701.5730257E-719.5925833
AACCGTA1900.00589293419.0769867
ATAGTAC5901.2732926E-1118.430313
TCTATAC5551.10958354E-1018.286413
GTAGTAC4155.253278E-717.4680843
CTATACT5401.5170372E-917.451914
GTACTCG2600.001783223216.7713991
TATACTA5703.1104719E-916.5333885
TACTCCG3153.5105174E-416.1094555
ATAGTGC6801.1641532E-1015.9910033
TAGTACT6801.1641532E-1015.9910034
CCGCACT4351.5838883E-514.9984594
CTAGTAC3406.273027E-414.9249363
GGATAGT6401.3922545E-814.7623231
CTAGACC6952.7066562E-914.6028164
ATACGTT3000.004706925214.4985096
CTAGACT5003.665249E-614.4985084
Produced by FastQC (version 0.11.5)