FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718572

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718572
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20028586
Sequences flagged as poor quality0
Sequence length151
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAA79550.013.4035471
GTATTAC60400.012.8495961
GTACTAA51550.012.3821651
GTAACGC12950.012.3164073
GTATTAT80300.012.1944111
GTCTTAG49900.011.9194421
GTCTTAA80000.011.6961341
GTATTAG40950.011.5133591
TACACCG47600.011.4229395
CTACACT75800.011.3816044
GCTTTAC93750.011.3733571
GGTTTAC52550.011.3183671
TAATACG10909.513315E-1011.3070194
GTTCTAA71400.011.27631951
GTGTTAC81400.011.1385391
GTTTTAT192650.010.9940191
CTATACT55550.010.9627864
GCCTTAT72800.010.8601981
GTGTTAA87650.010.6753081
GTACTAT45650.010.645761
Produced by FastQC (version 0.11.5)