FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005718575

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718575
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences15223009
Sequences flagged as poor quality0
Sequence length151
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GTATTAC45600.014.827741
TTTACGC11700.013.6308743
GTGTTAA62200.013.3251261
GGTTTAC44500.013.2337181
TCTAGAC43550.012.8170913
GTATTAT64950.012.3131851
GTGTATA56850.012.2771521
GTATTAG31050.012.1758311
GTATTGG62700.012.0593151
TATACCG8002.6716225E-711.7800965
GTTTACG15450.011.7643611
GTCGTAA14350.011.6528661
TAATACT67850.011.6456454
GTATAAT53700.011.6434331
GTATAGG26650.011.4580031
GTACTAA45100.011.4456021
GTCTTAC52200.011.2816171
TATATCG7802.5158333E-611.1527545
GTTTTAC85850.011.0939921
GTGTAGG80100.010.8919491
Produced by FastQC (version 0.11.5)