FastQCFastQC Report
Tue 28 Jun 2022
EGAF00005718615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005718615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences504173311
Sequences flagged as poor quality0
Sequence length24
%GC56

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CAGACGCGCTAGACCCTGCTATTG9093930.18037309396569784No Hit
CAGACGCGTGGTCAAGACAGCTAA8032430.15931882598204408No Hit
CAGACGCGTGTGGACACCTTAGAA7646290.15165995171053392No Hit
CAGACGCGCTAATCCACTGAATGT7312600.14504139430736349No Hit
CAGACGCGAACGGACCTCCCTCTG7213990.14308551925708737No Hit
CAGACGCGGCCTATTGATAGCCAA6228080.1235305372997025No Hit
CAGACGCGCCCAATTACGATAACC5689190.11284195089017712No Hit
CAGACGCGTCCTCAAACCCTAAGG5625160.11157195109837935No Hit
CAGACGCGCAAGGCTACTAAGGTT5433790.10777623252651707No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)