FastQCFastQC Report
Wed 20 Apr 2022
EGAF00005720113

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005720113
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences424257011
Sequences flagged as poor quality0
Sequence length151
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATCGGA2374700.019.7507321
ATCGGAA2504750.018.7678222
TCGGAAG2591900.018.1795273
CGGAAGA2744200.017.2444084
TATGCCG879200.013.9450693
ATGCCGT1134050.010.9899094
TGCCGTC1153150.010.9084765
CTCGTAT872600.010.807750-54
GCCGTCT1197100.010.5988336
TCTCGTA919800.010.33348350-54
AGAGCAC5055350.09.8140318
CGTATGC1015200.09.6990141
TCGTATG1048550.09.15175550-54
GAGCACA5503050.09.1117889
CGTCTTC1467200.08.8552498
GAAGAGC5797650.08.6725116
ATCTCGT1148700.08.50530750-54
CCGTCTT1525800.08.4818927
AAGAGCA8149150.06.590847
GTATGCC2099250.06.1986132
Produced by FastQC (version 0.11.5)