FastQCFastQC Report
Mon 8 Aug 2022
EGAF00005722766

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722766
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63528284
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGCGTTGATACCACTGCTTCTACACGA1135120.17867946818774452No Hit
GCTGCGGATATGGGTACGGCCCGGCGCG1043350.16423393397498348No Hit
CGTTCGTTATCGGAATTAACCAGACAAA997400.15700093520549052No Hit
CTGCGTTGATACCACTGCTTCTACACGC906110.14263095788955987No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC843140.1327188374866225No Hit
TGACTTTTACTTCCTCTAGATAGTCAAG708330.11149836819140274No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)