FastQCFastQC Report
Fri 29 Jul 2022
EGAF00005722798

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722798
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences376952773
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGTGC8345420.22139165958596094No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA6714770.17813292489030183No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATA6144610.1630074226831593No Hit
CGTTCGTTATCGGAATTAACCAGACAAA4561730.12101595549212209No Hit
CCACCTACTAAGAACGGCCATGCACCAC4247490.11267963268173119No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)