FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005722849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences221260968
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGTGC4056270.18332514933225819No Hit
CGTTCGTTATCGGAATTAACCAGACAAA2631920.11895093941738519No Hit
CCACCTACTAAGAACGGCCATGCACCAC2216810.10018983556105567No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)