FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005722859

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722859
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences82558893
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AAGCCGCAGGCTCCACTCCTGGTGGTGC1707320.206800253486926No Hit
CGTTCGTTATCGGAATTAACCAGACAAA1102880.1335870625106371No Hit
GTCTCGTTCGTTATCGGAATTAACCAGA964810.1168632433092338No Hit
CCTTTAAGTTTCAGCTTTGCAACCATAC958940.11615223571372257No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)