FastQCFastQC Report
Thu 28 Jul 2022
EGAF00005722892

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722892
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences272819374
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA3882020.14229268043111926No Hit
CGTTCGTTATCGGAATTAACCAGACAAA3621390.1327394732604291No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC3203560.11742421196230735No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)