FastQCFastQC Report
Fri 29 Jul 2022
EGAF00005722915

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005722915
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences370572001
Sequences flagged as poor quality0
Sequence length28
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA11989800.32354845934515164No Hit
CCACCTACTAAGAACGGCCATGCACCAC7242980.19545405428512122No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGC6829560.18429778778672487No Hit
CGTTCGTTATCGGAATTAACCAGACAAA5152820.13905044056472038No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)