FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724134

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724134
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9384921
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACACGC4350.002207881810.35830970
CATAGCG4600.00350895159.79535770
GATAGCG3200.0089628898.74031567
AGGGGGG31100.08.5995872
GAGGGGG46300.05.62444071
TGGGGGG61000.05.40930032
Produced by FastQC (version 0.11.5)