FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724140

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724140
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7230130
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG29550.013.1589282
GAGGGGG38800.010.1977371
TGGGGGG55450.09.8301032
GTGGGGG58450.08.728981
CGGATGA5950.004562386.41662138
GCACCCC13405.382284E-45.93636770
GGAGCAC17304.3700798E-45.254983470
Produced by FastQC (version 0.11.5)