FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences4877139
Sequences flagged as poor quality0
Sequence length35-76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CGACCGT1500.00625122613.89211651
TAAACGC3000.0055267289.27054461
ATCCGAT8306.344589E-45.86058721
CCATCCG9951.8272427E-45.586891719
CATCCGA9150.00218301435.31610620
TCATCGT8700.00700499775.19171527
AGGCAGC19103.4704403E-45.03243470
Produced by FastQC (version 0.11.5)