FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724154

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724154
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7482751
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TACCGGC5854.865434E-47.12456934
CTCGCGT6602.5819795E-46.83891616
TCGCGTT6800.00268497096.127378517
ACTCGCG7000.00371567775.951792215
CGTTCCG16051.5799742E-85.6246819
TCGGATT9405.15961E-45.540825427
CGTGAAC31502.5465852E-105.525357770
GTTCCGT18552.419256E-95.428062420
TTCGGAT8500.0053654485.311319431
CGGATTG8650.00659234455.218830628
CTAACCC11703.3689526E-45.04285539
Produced by FastQC (version 0.11.5)