Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005724206 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 6781903 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 38 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 9725 | 0.1433963299091715 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AGGGGGG | 2570 | 0.0 | 6.3411956 | 2 |
ATAGCCC | 1190 | 7.7341014E-4 | 6.24876 | 70 |
GGGGGCG | 1695 | 5.2416E-8 | 5.332108 | 56 |