FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724218

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724218
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5661334
Sequences flagged as poor quality0
Sequence length35-76
%GC38

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ACGTGGG6304.4104672E-49.064815570
CGACCTG4350.00155028787.98724464
CGGAGCA4150.0090127087.53875440
CACGAGT6300.0081325686.06934741
GCAGCCC14100.0059392225.26530770
Produced by FastQC (version 0.11.5)