FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724220

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724220
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9110182
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG117150.12859238157920447No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TAAACCG4401.0928134E-513.04570470
AGGGGGG49100.08.1031032
GAGGGGG55050.06.5335071
TGGGGGG78300.06.4068012
CATGCGC14251.5903969E-46.042220670
AGCTCGA6400.0097931085.96125649
GTGGGGG79450.05.9199131
CTCCGTC39251.2732926E-115.264813470
Produced by FastQC (version 0.11.5)