FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724252

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724252
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8078192
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN99070.12263882809420723No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGTGCG4955.2005734E-410.322412570
AGGGGGG44650.07.53480672
TGGGGGG71100.05.95130252
GAGGGGG47350.05.8605761
GCACTGC24554.3107266E-65.087624570
Produced by FastQC (version 0.11.5)