FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724282

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724282
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7429120
Sequences flagged as poor quality0
Sequence length35-76
%GC41

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AATCGGA5500.00198816886.9451749
CCCGGGG17602.5067257E-66.111077370
TTTGCGT6350.0084027916.050253466
TATTCCG10353.2537966E-45.36557059
GTCGGGA10350.00185863645.03381843
Produced by FastQC (version 0.11.5)