FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724300

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724300
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences6031945
Sequences flagged as poor quality0
Sequence length35-76
%GC40

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN75510.12518350217052707No Hit

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCGGGGG12350.008841835.503463370
AGCGGGG8850.00145338515.490646410
CGGAGTC14501.2596245E-55.0236941
Produced by FastQC (version 0.11.5)