FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724318

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724318
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9134905
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGTCGAC1900.00199280512.807940511
AGGGGGG36850.07.35104662
ACACGCC10150.00109831676.63313370
GAGGGGG41150.06.32804061
TGGGGGG59950.05.2136922
CGCCCCC14100.0073104965.172824470
Produced by FastQC (version 0.11.5)