FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724322

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724322
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9952347
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
AGGGGGG42500.015.6904352
GAGGGGG58100.010.8763341
CTTATCG3200.0094941828.67901640
TGGGGGG78100.08.5827992
GTGGGGG88150.07.0504691
Produced by FastQC (version 0.11.5)