FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724354

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724354
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7690039
Sequences flagged as poor quality0
Sequence length35-76
%GC43

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGCGGTT4350.002688137810.1155770
ACGGTTG2750.002732357710.09582646
GAACGTC3100.0072954998.96262817
CAAATCG7350.00294019987.48345770
TGATCCG37750.05.536767570
TTCGTAT12056.0379686E-45.13618569
CAACGTG14000.0084790795.107459570
CCCCGGG23954.912792E-65.05250570
Produced by FastQC (version 0.11.5)