Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005724378 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 4758618 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 6388 | 0.13424065558529807 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
AAACGTT | 655 | 7.030323E-4 | 8.650671 | 70 |
GCGCTCC | 705 | 0.0014573637 | 8.037148 | 70 |
GTGCCCC | 670 | 0.008271508 | 7.611299 | 70 |
CCTCGTG | 1110 | 3.727064E-4 | 6.636078 | 70 |
CGGGGGG | 1590 | 8.3493115E-4 | 5.3454623 | 70 |
CTCAGGG | 1485 | 0.002053372 | 5.341862 | 70 |