EGAF00005724391 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005724391
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	6683672
Sequences flagged as poor quality	0
Sequence length	35-76
%GC	38

Per base quality graph

Per base quality graph

Per Sequence quality graph

$Per base sequence content$

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN	20078	0.30040373016509486	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGCGCAT	510	52.416534	37
TCGCGCA	525	51.57517	36
GCGCATC	595	44.932846	38
TCTCGCG	620	44.782585	34
CTCGCGC	665	41.234303	35
TATGCCG	665	40.775097	48
CTCGTAT	685	39.05771	44
CGTATGC	715	38.40181	46
CGCATCT	710	38.148884	39
ACTCTCG	750	37.938087	32
TCTCGTA	710	37.187744	43
ATGCCGT	775	35.88937	49
GATCGGA	780	35.58813	1
TGCCGTC	795	34.118755	50
ACACGTC	815	34.05086	13
GCCGTCT	865	31.765697	51
TCGTATG	870	31.556313	45
ATCTCGT	870	31.141888	42
ATCGGAA	980	29.029457	2
TCGGAAG	980	28.321209	3