FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724444

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724444
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7825012
Sequences flagged as poor quality0
Sequence length35-76
%GC42

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CCCGTTG3000.001639082113.14475170
TCCGGAT6100.00587876.26234917
TGCTCGG7400.00103698476.098769
CGGATGA9203.8512223E-45.66214119
Produced by FastQC (version 0.11.5)