Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00005724452 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 5685372 |
Sequences flagged as poor quality | 0 |
Sequence length | 35-76 |
%GC | 39 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN | 7784 | 0.13691276489911303 | No Hit |
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGTGCTT | 425 | 0.0012278747 | 8.1780615 | 50 |
GGGGGCG | 1385 | 1.4807665E-7 | 5.7748914 | 56 |
GGGCGGG | 1590 | 7.2312105E-8 | 5.4714737 | 58 |
GGGGCGG | 1615 | 5.748043E-7 | 5.17007 | 57 |