FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005724494

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005724494
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences8315228
Sequences flagged as poor quality0
Sequence length35-76
%GC39

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[WARN]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TCTCGTC4954.6459136E-511.32776670
TTGCGAG3200.0094395928.68510861
GCCCCGG11355.551572E-46.422394370
CCGGGGG13157.2715164E-56.39609670
CCAGCCG9800.00557895056.293845770
AGGGGGG28300.05.6458352
Produced by FastQC (version 0.11.5)